ORK02058

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK02058

Order Kazusa clone(s) from :

Accession No
Product ID	ORK02058
Clone name	ah03162
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	TMEM132D
cDNA sequence	DNA sequence (5687 bp) Predicted protein sequence (1120 aa)
HaloTag ORF Clone	FHC02058
Flexi ORF Clone	FXC02058
Description	Transmembrane protein 132D precursor (Mature oligodendrocytes transmembrane protein) (Mature OL transmembrane protein).

Features of the cloned cDNA sequence

Description

Length: 5687 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: NO

Warning for coding interruption : NO

Integrity of 3' end

Length of 3'UTR	2144 bp
Genome contig ID	gi89161190r_128022224
PolyA signal sequence (TATAAA,-22)	+--------+--------+----*----+---- TACTGACTGTAAATATAAAGTTTGCATTCAGTGGC
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* TTTATGGCTGTCCTTTGTCTTCTACACGCTGACCCCCTCCAAGGGGCTGG

Features of the protein sequence

Description

Length: 1120 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
Q14C87	100.0	Transmembrane p...	Homo sapiens
BAC97794	99.9	HBE120 [Homo sa...	Homo sapiens
AAI14627	99.9	TMEM132D protei...	Homo sapiens
XP_001916304	87.8	similar to TMEM...	Equus caballus
EDL19538	82.5	transmembrane p...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	30	LWHHWSPVLISLAALFSKVTEGR	52	SECONDARY	23
SOSUI2	2	941	MYALLGVFCLAILVFLINCVTFA	963	PRIMARY	23