Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK06326
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209917 |
|---|---|
| Product ID | ORK06326 |
| Clone name | ej00931 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | ECI2 |
| cDNA sequence | DNA sequence (3870 bp) Predicted protein sequence (232 aa) |
| Description | Peroxisomal 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) (Dodecenoyl-CoA isomerase) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (DBI-related protein 1) (DRS-1) (Hepatocellular carcinoma- associated antigen 88) (Renal carcinoma antige |
Length: 3870 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 3171 bp |
|---|---|
| Genome contig ID | gi89161210r_3960941 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 232 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR000582 | 50 | 120 | PD351532 | Acyl-coA-binding protein |
| FPrintScan | IPR000582 | 47 | 62 | PR00689 | Acyl-coA-binding protein |
| IPR000582 | 64 | 82 | PR00689 | Acyl-coA-binding protein | |
| IPR000582 | 87 | 102 | PR00689 | Acyl-coA-binding protein | |
| IPR000582 | 108 | 125 | PR00689 | Acyl-coA-binding protein | |
| HMMPfam | IPR000582 | 46 | 130 | PF00887 | Acyl-coA-binding protein |
| IPR001753 | 158 | 213 | PF00378 | Crotonase | |
| ProfileScan | IPR000582 | 46 | 131 | PS51228 | Acyl-coA-binding protein |
| ScanRegExp | IPR000582 | 64 | 82 | PS00880 | Acyl-coA-binding protein |
