Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK06424
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209867 |
|---|---|
| Product ID | ORK06424 |
| Clone name | ef03678 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | POLQ |
| cDNA sequence | DNA sequence (8507 bp) Predicted protein sequence (2214 aa) |
| Description | DNA polymerase theta (EC 2.7.7.7) (DNA polymerase eta). |
Length: 8507 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : YES Integrity of 3' end
| Length of 3'UTR | 678 bp |
|---|---|
| Genome contig ID | gi89161205r_122533163 |
| PolyA signal sequence (None) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 2214 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR002298 | 1852 | 1874 | PR00868 | DNA polymerase A |
| IPR002298 | 2094 | 2110 | PR00868 | DNA polymerase A | |
| HMMPfam | IPR001650 | 30 | 109 | PF00271 | DNA/RNA helicase |
| IPR001098 | 1718 | 2209 | PF00476 | DNA-directed DNA polymerase | |
| HMMSmart | IPR001650 | 23 | 109 | SM00490 | DNA/RNA helicase |
| IPR001098 | 1935 | 2174 | SM00482 | DNA-directed DNA polymerase | |
| ProfileScan | IPR001650 | 1 | 178 | PS51194 | DNA/RNA helicase |
| ScanRegExp | IPR001098 | 2003 | 2022 | PS00447 | DNA-directed DNA polymerase |
