Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK06546
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Accession No AB209034
Product ID ORK06546
Clone name hh01184
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol PXN
cDNA sequence DNA sequence (5457 bp)
Predicted protein sequence (713 aa)
Description Paxillin.
Features of the cloned cDNA sequence

Length: 5457 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : YES
Integrity of 3' end
Length of 3'UTR 3247 bp
Genome contig ID gi89161190r_119032637
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 713 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92271 0 100.0 Paxillin varian...
Homo sapiens
XP_001159707 0 98.8 similar to Paxi...
Pan troglodytes
BAA18998 1.3e-80 81.9 paxillin gamma ...
Homo sapiens
AAC05175 3e-80 81.6 cytoskeletal pr...
Homo sapiens
AAC50104 1.5e-79 92.5 paxillin [Homo ...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001904 27 49 PR00832 Paxillin
IPR001904 50 73 PR00832 Paxillin
IPR001904 74 96 PR00832 Paxillin
IPR001904 120 139 PR00832 Paxillin
IPR001904 144 166 PR00832 Paxillin
IPR001904 169 192 PR00832 Paxillin
IPR001904 205 226 PR00832 Paxillin
IPR001904 227 246 PR00832 Paxillin
IPR001904 247 266 PR00832 Paxillin
HMMPfam IPR001904 51 260 PF03535 Paxillin
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