Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK11054
Order Kazusa clone(s) from : Japan || Other countries
Accession No
Product ID ORK11054
Clone name bm02540
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol HADH
cDNA sequence DNA sequence (1826 bp)
Predicted protein sequence (339 aa)
Flexi ORF Clone FXC11054
Description hydroxyacyl-Coenzyme A dehydrogenase
Features of the cloned cDNA sequence

Length: 1826 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 806 bp
Genome contig ID gi89161207f_109030463
PolyA signal sequence
Flanking genome sequence
(145307 - 145356)

Features of the protein sequence

Length: 339 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAX06219 2e-130 100.0 L-3-hydroxyacyl...
Homo sapiens
Q16836 4.8e-118 100.0 Hydroxyacyl-coe...
Homo sapiens
CAA65528 1.1e-117 99.6 3-hydroxyacyl-C...
Homo sapiens
BAG37053 1.8e-117 99.6 unnamed protein...
Homo sapiens
NP_005318 3.7e-117 99.6 hydroxyacyl-coe...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR006176 52 239 PF02737 3-hydroxyacyl-CoA dehydrogenase
IPR006108 241 338 PF00725 3-hydroxyacyl-CoA dehydrogenase
ScanRegExp IPR006180 238 262 PS00067 3-hydroxyacyl-CoA dehydrogenase
Order Kazusa clone(s) from : Japan || Other countries
Send a message to office AT kazusa.or.jp