Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK11640
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK11640 |
| Clone name | ee22834 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | ZNF182 |
| cDNA sequence | DNA sequence (3556 bp) Predicted protein sequence (686 aa) |
|
HaloTag ORF Clone |
FHC11640
|
| Flexi ORF Clone | FXC11640 |
| Description | zinc finger protein 182 |
Length: 3556 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1318 bp |
|---|---|
| Genome contig ID | gi89161218r_47619195 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 686 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 281 | 304 | PD000003 | Zinc finger |
| IPR007087 | 309 | 332 | PD000003 | Zinc finger | |
| IPR007087 | 337 | 360 | PD000003 | Zinc finger | |
| IPR007087 | 365 | 388 | PD000003 | Zinc finger | |
| IPR007087 | 421 | 444 | PD000003 | Zinc finger | |
| IPR007087 | 449 | 472 | PD000003 | Zinc finger | |
| IPR007087 | 477 | 500 | PD000003 | Zinc finger | |
| IPR007087 | 505 | 528 | PD000003 | Zinc finger | |
| IPR007087 | 533 | 556 | PD000003 | Zinc finger | |
| IPR007087 | 561 | 584 | PD000003 | Zinc finger | |
| IPR007087 | 589 | 612 | PD000003 | Zinc finger | |
| IPR007087 | 617 | 640 | PD000003 | Zinc finger | |
| IPR007087 | 645 | 667 | PD000003 | Zinc finger | |
| HMMPfam | IPR001909 | 74 | 114 | PF01352 | KRAB box |
| IPR007087 | 281 | 303 | PF00096 | Zinc finger | |
| IPR007087 | 309 | 331 | PF00096 | Zinc finger | |
| IPR007087 | 337 | 359 | PF00096 | Zinc finger | |
| IPR007087 | 365 | 387 | PF00096 | Zinc finger | |
| IPR007087 | 393 | 415 | PF00096 | Zinc finger | |
| IPR007087 | 421 | 443 | PF00096 | Zinc finger | |
| IPR007087 | 449 | 471 | PF00096 | Zinc finger | |
| IPR007087 | 477 | 499 | PF00096 | Zinc finger | |
| IPR007087 | 505 | 527 | PF00096 | Zinc finger | |
| IPR007087 | 533 | 555 | PF00096 | Zinc finger | |
| IPR007087 | 561 | 583 | PF00096 | Zinc finger | |
| IPR007087 | 589 | 611 | PF00096 | Zinc finger | |
| IPR007087 | 617 | 639 | PF00096 | Zinc finger | |
| IPR007087 | 645 | 667 | PF00096 | Zinc finger | |
| HMMSmart | IPR001909 | 74 | 134 | SM00349 | KRAB box |
| IPR015880 | 281 | 303 | SM00355 | Zinc finger | |
| IPR015880 | 309 | 331 | SM00355 | Zinc finger | |
| IPR015880 | 337 | 359 | SM00355 | Zinc finger | |
| IPR015880 | 365 | 387 | SM00355 | Zinc finger | |
| IPR015880 | 393 | 415 | SM00355 | Zinc finger | |
| IPR015880 | 421 | 443 | SM00355 | Zinc finger | |
| IPR015880 | 449 | 471 | SM00355 | Zinc finger | |
| IPR015880 | 477 | 499 | SM00355 | Zinc finger | |
| IPR015880 | 505 | 527 | SM00355 | Zinc finger | |
| IPR015880 | 533 | 555 | SM00355 | Zinc finger | |
| IPR015880 | 561 | 583 | SM00355 | Zinc finger | |
| IPR015880 | 589 | 611 | SM00355 | Zinc finger | |
| IPR015880 | 617 | 639 | SM00355 | Zinc finger | |
| IPR015880 | 645 | 667 | SM00355 | Zinc finger | |
| ProfileScan | IPR001909 | 74 | 145 | PS50805 | KRAB box |
| IPR007087 | 253 | 280 | PS50157 | Zinc finger | |
| IPR007087 | 281 | 308 | PS50157 | Zinc finger | |
| IPR007087 | 309 | 336 | PS50157 | Zinc finger | |
| IPR007087 | 337 | 364 | PS50157 | Zinc finger | |
| IPR007087 | 365 | 392 | PS50157 | Zinc finger | |
| IPR007087 | 393 | 420 | PS50157 | Zinc finger | |
| IPR007087 | 421 | 448 | PS50157 | Zinc finger | |
| IPR007087 | 449 | 476 | PS50157 | Zinc finger | |
| IPR007087 | 477 | 504 | PS50157 | Zinc finger | |
| IPR007087 | 505 | 532 | PS50157 | Zinc finger | |
| IPR007087 | 533 | 560 | PS50157 | Zinc finger | |
| IPR007087 | 561 | 588 | PS50157 | Zinc finger | |
| IPR007087 | 589 | 616 | PS50157 | Zinc finger | |
| IPR007087 | 617 | 644 | PS50157 | Zinc finger | |
| IPR007087 | 645 | 672 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 283 | 303 | PS00028 | Zinc finger |
| IPR007087 | 311 | 331 | PS00028 | Zinc finger | |
| IPR007087 | 339 | 359 | PS00028 | Zinc finger | |
| IPR007087 | 367 | 387 | PS00028 | Zinc finger | |
| IPR007087 | 395 | 415 | PS00028 | Zinc finger | |
| IPR007087 | 423 | 443 | PS00028 | Zinc finger | |
| IPR007087 | 451 | 471 | PS00028 | Zinc finger | |
| IPR007087 | 479 | 499 | PS00028 | Zinc finger | |
| IPR007087 | 507 | 527 | PS00028 | Zinc finger | |
| IPR007087 | 535 | 555 | PS00028 | Zinc finger | |
| IPR007087 | 563 | 583 | PS00028 | Zinc finger | |
| IPR007087 | 591 | 611 | PS00028 | Zinc finger | |
| IPR007087 | 619 | 639 | PS00028 | Zinc finger | |
| IPR007087 | 647 | 667 | PS00028 | Zinc finger |
