Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK11783
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Accession No
Product ID ORK11783
Clone name bm03186
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol HSD17B11
cDNA sequence DNA sequence (1650 bp)
Predicted protein sequence (314 aa)
Flexi ORF Clone FXC11783
Description Estradiol 17-beta-dehydrogenase 11 Precursor (EC dehydrogenase 11)(17-beta-HSD 11)(17betaHSD11)(17bHSD11)(17-beta-HSD XI)(17betaHSDXI)(Dehydrogenase/reductase SDR family member 8)(Retinal short-chain dehydrogenase/reductase 2)(retSDR2)(Cutaneous T-cell lymphoma-associated antigen HD-CL-03)(CTCL tumor antigen HD-CL-03)
Features of the cloned cDNA sequence

Length: 1650 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 664 bp
Genome contig ID gi89161207r_88376789
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 314 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q8NBQ5 5e-123 100.0 Estradiol 17-be...
Homo sapiens
BAC11560 1.3e-122 99.6 unnamed protein...
Homo sapiens
NP_057329 1.3e-122 99.6 estradiol 17-be...
Homo sapiens
Q5NVG2 4.6e-122 98.6 Estradiol 17-be...
Pongo abelii
AAH08650 9e-119 97.3 HSD17B11 protei...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR002347 52 69 PR00081 Glucose/ribitol dehydrogenase
IPR002347 126 137 PR00081 Glucose/ribitol dehydrogenase
IPR002198 126 137 PR00080 Short-chain dehydrogenase/reductase SDR
IPR002347 173 189 PR00081 Glucose/ribitol dehydrogenase
IPR002198 179 187 PR00080 Short-chain dehydrogenase/reductase SDR
IPR002347 199 218 PR00081 Glucose/ribitol dehydrogenase
IPR002198 199 218 PR00080 Short-chain dehydrogenase/reductase SDR
IPR002347 223 240 PR00081 Glucose/ribitol dehydrogenase
HMMPfam IPR002198 51 218 PF00106 Short-chain dehydrogenase/reductase SDR

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
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