ORK11829

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK11829

Order Kazusa clone(s) from :

Accession No
Product ID	ORK11829
Clone name	hg02982
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	B4GALT4
cDNA sequence	DNA sequence (6497 bp) Predicted protein sequence (356 aa)
HaloTag ORF Clone	FHC11829
Flexi ORF Clone	FXC11829
Description	Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4)(Beta4Gal-T4)(b4Gal-T4)(EC 2.4.1.-)(UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 4)(UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 4) [Includes N-acetyllactosamine synthase(EC 2.4.1.90)(Nal synthetase);Beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase(EC 2.4.1.-)]

Features of the cloned cDNA sequence

Description

Length: 6497 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: NO

Warning for coding interruption : YES

Features of the protein sequence

Description

Length: 356 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
O60513	1.8e-155	100.0	Beta-1,4-galact...	Homo sapiens
BAG50847	4e-155	99.7	unnamed protein...	Homo sapiens
AAH04523	4e-155	99.7	UDP-Gal:betaGlc...	Homo sapiens
AAG50147	1.5e-154	99.4	beta-1,4-galact...	Homo sapiens
XP_001108377	2.1e-151	96.8	UDP-Gal:betaGlc...	Macaca mulatta

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR003859	89	356	PF02709	Metazoa galactosyltransferase

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	26	RLLLLLTLCLTVVGWATSNYFVG	48	PRIMARY	23