ORK11847

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK11847

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Accession No
Product ID	ORK11847
Clone name	bm05211
Vector information	The cDNA fragment was inserted at the XhoI-SacI site of the ... The cDNA fragment was inserted at the XhoI-SacI site of the pBC SK+ vector (Cm resistance; http://www.kazusa.or.jp/huge/vectorinfo/pbcskp_s.txt) with sequences including attB1 and attB2 sites (CTCGAGCAGCTGAAGCTTTCACAAGTTTGTAC AAAAAAGCAGGCTCTTC-5' end of cDNA, GAGCTCTCACCACTTTGTAC AAGAAAGCTGGGCGGCCGCTTTTTTTTTTTTTTTTTT-3' end of cDNA).
Symbol	TMX2
cDNA sequence	DNA sequence (2786 bp) Predicted protein sequence (292 aa)
HaloTag ORF Clone	FHC11847
Flexi ORF Clone	FXC11847
Description	Thioredoxin domain-containing protein 14 Precursor (Thioredoxin-related transmembrane protein 2)(Proliferation-inducing gene 26 protein)

Features of the cloned cDNA sequence

Description

Length: 2786 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: YES

Warning for coding interruption : YES

Features of the protein sequence

Description

Length: 292 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
Q9Y320	4.8e-128	100.0	Thioredoxin-rel...	Homo sapiens
EAW73779	5e-128	100.0	thioredoxin dom...	Homo sapiens
BAG35827	7.7e-128	99.6	unnamed protein...	Homo sapiens
AAS66642	1.5e-127	99.3	proliferation-i...	Homo sapiens
BAD96778	3.3e-127	99.3	thioredoxin-rel...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR006662	154	162	PR00421	Thioredoxin-related
	IPR006662	162	171	PR00421	Thioredoxin-related
	IPR006662	209	220	PR00421	Thioredoxin-related
HMMPfam	IPR013766	133	244	PF00085	Thioredoxin domain
ScanRegExp	IPR001005	240	248	PS00037	SANT

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	20	PYYLLSALLSAAFLLVRKLPPLC	42	SECONDARY	23
	2	56	DFDWREVEILMFLSAIVMMK	75	SECONDARY	20
	3	98	TILFFRLDIRMGLLYITLCIVFL	120	PRIMARY	23