ORK07607

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK07607

Order Kazusa clone(s) from :

Accession No	AK226054
Product ID	ORK07607
Clone name	fk00081
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	MOXD1
cDNA sequence	DNA sequence (2142 bp) Predicted protein sequence (348 aa)
Description	monooxygenase, DBH-like 1 isoform 2

Features of the cloned cDNA sequence

Description

Length: 2142 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: YES

Warning for coding interruption : NO

Integrity of 3' end

Length of 3'UTR	1095 bp
Genome contig ID	gi89161210r_132558890
PolyA signal sequence (AATAAA,-18)	+--------+--------+----*----+---- TCTGTTTGGATCATATTAATAAACTAAATGAAATT
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* ACACTTTTGTGTGGTATTTTATACATTGTTTAAGAAAAGTAAGTGATTCA

Features of the protein sequence

Description

Length: 348 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAC11263	1e-159	100.0	unnamed protein...	Homo sapiens
CAI15715	1e-159	100.0	monooxygenase, ...	Homo sapiens
XP_001168987	1e-159	100.0	monooxygenase, ...	Pan troglodytes
EAW48032	1.1e-159	100.0	monooxygenase, ...	Homo sapiens
XP_527504	1.1e-159	100.0	monooxygenase, ...	Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR000945	7	26	PR00767	Dopamine-beta-monooxygenase
	IPR000945	71	88	PR00767	Dopamine-beta-monooxygenase
	IPR000945	272	292	PR00767	Dopamine-beta-monooxygenase
HMMPfam	IPR000323	3	53	PF01082	Copper type II
HMMPfam	IPR014783	68	232	PF03712	Copper type II

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	1	FLTCETVIFAWAIGGEGFSYPP	22	SECONDARY	22
SOSUI2	2	325	HRDFSINLLVCLLLLSCTLSTKS	347	PRIMARY	23