ORK07623

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK07623

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Accession No	AB209002
Product ID	ORK07623
Clone name	hf00566
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	JRK
cDNA sequence	DNA sequence (7187 bp) Predicted protein sequence (412 aa)
Description	Homo sapiens mRNA for jerky homolog variant protein.

Features of the cloned cDNA sequence

Description

Length: 7187 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: YES

Warning for coding interruption : NO

Features of the protein sequence

Description

Length: 412 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD92239	5.4e-176	100.0	jerky homolog v...	Homo sapiens
NP_003715	8.5e-175	99.7	jerky protein h...	Homo sapiens
AAC32352	3.8e-174	99.5	unknown [Homo s...	Homo sapiens
O75564	4.1e-174	99.5	Jerky protein h...	Homo sapiens
JE0225	4.1e-174	99.5	JH8 protein - h...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR004875	22	226	PF03184	CENP-B protein

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