ORK06488

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK06488

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Accession No	AB209671
Product ID	ORK06488
Clone name	pf03512
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	PRKCG
cDNA sequence	DNA sequence (2394 bp) Predicted protein sequence (239 aa)
Description	Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma).

Features of the cloned cDNA sequence

Description

Length: 2394 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: YES

Warning for coding interruption : YES

Features of the protein sequence

Description

Length: 239 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD92908	9.4e-108	100.0	protein kinase ...	Homo sapiens
AAA60102	4.8e-102	99.5	protein kinase ...	Homo sapiens
P05129	8.5e-102	99.5	Protein kinase ...	Homo sapiens
BAG35228	2.1e-101	99.1	unnamed protein...	Homo sapiens
ACC68923	3.4e-101	99.1	protein kinase ...	Rhinolophus fer...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR002219	43	57	PR00008	Protein kinase C
	IPR002219	59	68	PR00008	Protein kinase C
	IPR002219	72	83	PR00008	Protein kinase C
	IPR002219	149	161	PR00008	Protein kinase C
	IPR000008	198	210	PR00360	C2 calcium-dependent membrane targeting
	IPR000008	227	239	PR00360	C2 calcium-dependent membrane targeting
HMMPfam	IPR002219	46	98	PF00130	Protein kinase C
	IPR002219	111	163	PF00130	Protein kinase C
	IPR000008	183	239	PF00168	C2 calcium-dependent membrane targeting
HMMSmart	IPR002219	46	95	SM00109	Protein kinase C
HMMSmart	IPR002219	111	160	SM00109	Protein kinase C
ProfileScan	IPR002219	45	95	PS50081	Protein kinase C
	IPR002219	110	160	PS50081	Protein kinase C
	IPR000008	180	239	PS50004	C2 calcium-dependent membrane targeting
ScanRegExp	IPR002219	46	95	PS00479	Protein kinase C
ScanRegExp	IPR002219	111	160	PS00479	Protein kinase C

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