Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK11839
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK11839 |
| Clone name | pf03857 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZSCAN29 |
| cDNA sequence | DNA sequence (6446 bp) Predicted protein sequence (861 aa) |
| Description | Zinc finger and SCAN domain-containing protein 29 (Zinc finger protein 690) |
Length: 6446 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 2901 bp |
|---|---|
| Genome contig ID | gi51511731r_41337866 |
| PolyA signal sequence (AATAAA,-24) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (99796 - 99747) |
----+----*----+----*----+----*----+----*----+----* |
Length: 861 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 687 | 710 | PD000003 | Zinc finger |
| IPR007087 | 715 | 738 | PD000003 | Zinc finger | |
| IPR007087 | 743 | 766 | PD000003 | Zinc finger | |
| IPR007087 | 771 | 794 | PD000003 | Zinc finger | |
| IPR007087 | 799 | 822 | PD000003 | Zinc finger | |
| HMMPfam | IPR003309 | 21 | 116 | PF02023 | Transcriptional regulator SCAN |
| IPR007087 | 687 | 709 | PF00096 | Zinc finger | |
| IPR007087 | 715 | 737 | PF00096 | Zinc finger | |
| IPR007087 | 743 | 765 | PF00096 | Zinc finger | |
| IPR007087 | 771 | 793 | PF00096 | Zinc finger | |
| IPR007087 | 799 | 821 | PF00096 | Zinc finger | |
| IPR007087 | 827 | 849 | PF00096 | Zinc finger | |
| HMMSmart | IPR003309 | 23 | 135 | SM00431 | Transcriptional regulator SCAN |
| IPR015880 | 687 | 709 | SM00355 | Zinc finger | |
| IPR015880 | 715 | 737 | SM00355 | Zinc finger | |
| IPR015880 | 743 | 765 | SM00355 | Zinc finger | |
| IPR015880 | 771 | 793 | SM00355 | Zinc finger | |
| IPR015880 | 799 | 821 | SM00355 | Zinc finger | |
| IPR015880 | 827 | 849 | SM00355 | Zinc finger | |
| ProfileScan | IPR003309 | 27 | 108 | PS50804 | Transcriptional regulator SCAN |
| IPR007087 | 687 | 714 | PS50157 | Zinc finger | |
| IPR007087 | 715 | 742 | PS50157 | Zinc finger | |
| IPR007087 | 743 | 770 | PS50157 | Zinc finger | |
| IPR007087 | 771 | 798 | PS50157 | Zinc finger | |
| IPR007087 | 799 | 826 | PS50157 | Zinc finger | |
| IPR007087 | 827 | 854 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 689 | 709 | PS00028 | Zinc finger |
| IPR007087 | 717 | 737 | PS00028 | Zinc finger | |
| IPR007087 | 745 | 765 | PS00028 | Zinc finger | |
| IPR007087 | 773 | 793 | PS00028 | Zinc finger | |
| IPR007087 | 801 | 821 | PS00028 | Zinc finger | |
| IPR007087 | 829 | 849 | PS00028 | Zinc finger |
