Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK00237
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK00237 |
| Clone name | ef04341 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | RACGAP1 |
| cDNA sequence | DNA sequence (3054 bp) Predicted protein sequence (635 aa) |
|
HaloTag ORF Clone |
FHC00237
|
| Flexi ORF Clone | FXC00237 |
| Description | Rac GTPase-activating protein 1 (MgcRacGAP). |
Length: 3054 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1104 bp |
|---|---|
| Genome contig ID | gi89161190r_48569214 |
| PolyA signal sequence (AGTAAA,-22) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 635 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR002219 | 290 | 341 | PF00130 | Protein kinase C |
| IPR000198 | 366 | 516 | PF00620 | RhoGAP | |
| HMMSmart | IPR002219 | 290 | 338 | SM00109 | Protein kinase C |
| IPR000198 | 363 | 539 | SM00324 | RhoGAP | |
| ProfileScan | IPR002219 | 289 | 338 | PS50081 | Protein kinase C |
| IPR000198 | 352 | 542 | PS50238 | RhoGAP | |
| ScanRegExp | IPR002219 | 290 | 338 | PS00479 | Protein kinase C |
