Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK00996
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK00996 |
| Clone name | fk13090 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | SYTL4 |
| cDNA sequence | DNA sequence (3608 bp) Predicted protein sequence (672 aa) |
|
HaloTag ORF Clone |
FHC00996
|
| Flexi ORF Clone | FXC00996 |
| Description | Synaptotagmin-like protein 4 (Exophilin-2) (Granuphilin). |
Length: 3608 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1536 bp |
|---|---|
| Genome contig ID | gi89161218r_99716147 |
| PolyA signal sequence (AATAAA,-21) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 672 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR001565 | 361 | 376 | PR00399 | Synaptotagmin |
| IPR001565 | 376 | 389 | PR00399 | Synaptotagmin | |
| IPR001565 | 434 | 449 | PR00399 | Synaptotagmin | |
| IPR001565 | 454 | 464 | PR00399 | Synaptotagmin | |
| IPR000008 | 544 | 556 | PR00360 | C2 calcium-dependent membrane targeting | |
| IPR000008 | 573 | 586 | PR00360 | C2 calcium-dependent membrane targeting | |
| IPR000008 | 598 | 606 | PR00360 | C2 calcium-dependent membrane targeting | |
| HMMPfam | IPR003315 | 1 | 220 | PF02318 | Rabphilin-3A effector |
| IPR000008 | 374 | 463 | PF00168 | C2 calcium-dependent membrane targeting | |
| IPR000008 | 529 | 618 | PF00168 | C2 calcium-dependent membrane targeting | |
| HMMSmart | IPR000008 | 373 | 478 | SM00239 | C2 calcium-dependent membrane targeting |
| IPR000008 | 528 | 633 | SM00239 | C2 calcium-dependent membrane targeting | |
| ProfileScan | IPR010911 | 5 | 123 | PS50916 | Rab-binding |
| IPR000008 | 373 | 463 | PS50004 | C2 calcium-dependent membrane targeting | |
| IPR000008 | 528 | 618 | PS50004 | C2 calcium-dependent membrane targeting |
