Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK00998
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Accession No AB210025
Product ID ORK00998
Clone name ha04849
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of th ...
Symbol TP53BP1
cDNA sequence DNA sequence (6179 bp)
Predicted protein sequence (1984 aa)
Flexi ORF Clone FXC00998
Description Tumor suppressor p53-binding protein 1 (p53-binding protein 1) (p53BP1) (53BP1).
Features of the cloned cDNA sequence

Length: 6179 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 167 bp
Genome contig ID gi51511731r_41386706
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 1984 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAE06107 0 100.0 TP53BP1 variant...
Homo sapiens
BAG10235 0 100.0 tumor protein p...
synthetic construct
EAW92604 0 99.8 tumor protein p...
Homo sapiens
Q12888 0 99.8 Tumor suppresso...
Homo sapiens
AAW69392 0 99.7 tumor protein p...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR015125 1497 1618 PF09038 Tumour suppressor p53-binding protein-1 Tudor
IPR001357 1807 1847 PF00533 BRCT
IPR001357 1876 1963 PF00533 BRCT
HMMSmart IPR001357 1675 1850 SM00292 BRCT
IPR001357 1878 1966 SM00292 BRCT
ProfileScan IPR001357 1736 1860 PS50172 BRCT
IPR001357 1876 1976 PS50172 BRCT
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