Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01096
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Accession No
Product ID ORK01096
Clone name hj00601s2
Vector information
The cDNA fragment was inserted at the KpnI (blunt ended)-Not ...
Symbol ARAP2
cDNA sequence DNA sequence (7580 bp)
Predicted protein sequence (1742 aa)
Flexi ORF Clone FXC01096
Description ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
Features of the cloned cDNA sequence

Length: 7580 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1906 bp
Genome contig ID gi89161207r_35644017
PolyA signal sequence
(ATTAAA,-27)
+----*----+----*----+----*----+----
GAGTAAACATTAAAATTGTTTTACAAGTCTACTTG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AATGTGACTTTATTATTTTCAGAAGTTGAAGGTTGTTATTGTGAAATAGA

Features of the protein sequence

Length: 1742 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q8WZ64 0 100.0 Arf-GAP with Rh...
Homo sapiens
EAW92872 0 99.9 centaurin, delt...
Homo sapiens
AAL32459 0 99.8 PARX protein [H...
Homo sapiens
XP_001135477 0 99.1 centaurin delta...
Pan troglodytes
AAI50259 0 100.0 ARAP2 protein [...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001164 735 754 PR00405 Arf GTPase activating protein
IPR001164 754 771 PR00405 Arf GTPase activating protein
HMMPfam IPR001660 43 106 PF00536 Sterile alpha motif SAM
IPR001849 521 612 PF00169 Pleckstrin-like
IPR001849 626 717 PF00169 Pleckstrin-like
IPR001164 723 845 PF01412 Arf GTPase activating protein
IPR001849 931 1041 PF00169 Pleckstrin-like
IPR000198 1167 1320 PF00620 RhoGAP
IPR000159 1364 1458 PF00788 Ras-association
IPR001849 1473 1575 PF00169 Pleckstrin-like
HMMSmart IPR001660 42 108 SM00454 Sterile alpha motif SAM
IPR001849 521 614 SM00233 Pleckstrin-like
IPR001849 626 719 SM00233 Pleckstrin-like
IPR001164 724 845 SM00105 Arf GTPase activating protein
IPR001849 931 1043 SM00233 Pleckstrin-like
IPR001849 1053 1152 SM00233 Pleckstrin-like
IPR000198 1164 1340 SM00324 RhoGAP
IPR001849 1473 1577 SM00233 Pleckstrin-like
ProfileScan IPR001660 48 108 PS50105 Sterile alpha motif SAM
IPR001849 520 612 PS50003 Pleckstrin-like
IPR001849 625 717 PS50003 Pleckstrin-like
IPR001164 714 849 PS50115 Arf GTPase activating protein
IPR001849 916 1041 PS50003 Pleckstrin-like
IPR000198 1154 1335 PS50238 RhoGAP
IPR000159 1364 1458 PS50200 Ras-association
IPR001849 1472 1575 PS50003 Pleckstrin-like

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 11 KPVEKYIFLCVCLIVPLFVTQLS 33 PRIMARY 23
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