Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01221
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01221 |
| Clone name | hh00253 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZXDB |
| cDNA sequence | DNA sequence (5630 bp) Predicted protein sequence (870 aa) |
|
HaloTag ORF Clone |
FHC01221
|
| Flexi ORF Clone | FXC01221 |
| Description | Zinc finger X-linked protein ZXDB. |
Length: 5630 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 3015 bp |
|---|---|
| Genome contig ID | gi89161218f_57535004 |
| PolyA signal sequence (AATAAA,-23) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (105631 - 105680) |
----+----*----+----*----+----*----+----*----+----* |
Length: 870 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR007087 | 338 | 362 | PF00096 | Zinc finger |
| IPR007087 | 371 | 395 | PF00096 | Zinc finger | |
| IPR007087 | 401 | 425 | PF00096 | Zinc finger | |
| IPR007087 | 431 | 453 | PF00096 | Zinc finger | |
| IPR007087 | 460 | 484 | PF00096 | Zinc finger | |
| IPR007087 | 491 | 515 | PF00096 | Zinc finger | |
| IPR007087 | 521 | 545 | PF00096 | Zinc finger | |
| IPR007087 | 551 | 575 | PF00096 | Zinc finger | |
| IPR007087 | 614 | 639 | PF00096 | Zinc finger | |
| HMMSmart | IPR015880 | 338 | 362 | SM00355 | Zinc finger |
| IPR015880 | 371 | 395 | SM00355 | Zinc finger | |
| IPR015880 | 401 | 425 | SM00355 | Zinc finger | |
| IPR015880 | 431 | 453 | SM00355 | Zinc finger | |
| IPR015880 | 460 | 484 | SM00355 | Zinc finger | |
| IPR015880 | 491 | 515 | SM00355 | Zinc finger | |
| IPR015880 | 521 | 545 | SM00355 | Zinc finger | |
| IPR015880 | 551 | 575 | SM00355 | Zinc finger | |
| IPR015880 | 581 | 605 | SM00355 | Zinc finger | |
| IPR015880 | 614 | 639 | SM00355 | Zinc finger | |
| ProfileScan | IPR007087 | 338 | 367 | PS50157 | Zinc finger |
| IPR007087 | 371 | 400 | PS50157 | Zinc finger | |
| IPR007087 | 401 | 430 | PS50157 | Zinc finger | |
| IPR007087 | 431 | 458 | PS50157 | Zinc finger | |
| IPR007087 | 460 | 489 | PS50157 | Zinc finger | |
| IPR007087 | 491 | 520 | PS50157 | Zinc finger | |
| IPR007087 | 521 | 550 | PS50157 | Zinc finger | |
| IPR007087 | 551 | 580 | PS50157 | Zinc finger | |
| IPR007087 | 581 | 610 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 340 | 362 | PS00028 | Zinc finger |
| IPR007087 | 373 | 395 | PS00028 | Zinc finger | |
| IPR007087 | 403 | 425 | PS00028 | Zinc finger | |
| IPR007087 | 433 | 453 | PS00028 | Zinc finger | |
| IPR007087 | 462 | 484 | PS00028 | Zinc finger | |
| IPR007087 | 493 | 515 | PS00028 | Zinc finger | |
| IPR007087 | 523 | 545 | PS00028 | Zinc finger | |
| IPR007087 | 553 | 575 | PS00028 | Zinc finger | |
| IPR007087 | 583 | 605 | PS00028 | Zinc finger | |
| IPR007087 | 616 | 639 | PS00028 | Zinc finger |
