Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01242
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AK226051 |
|---|---|
| Product ID | ORK01242 |
| Clone name | fk02491 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | JUP |
| cDNA sequence | DNA sequence (3483 bp) Predicted protein sequence (781 aa) |
|
HaloTag ORF Clone |
FHC01242
|
| Flexi ORF Clone | FXC01242 |
| Description | Junction plakoglobin (Desmoplakin-3) (Desmoplakin III) (Catenin gamma). |
Length: 3483 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1135 bp |
|---|---|
| Genome contig ID | gi51511734r_37064387 |
| PolyA signal sequence (AATAAA,-19) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 781 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR013284 | 114 | 134 | PR01869 | Beta-catenin |
| IPR013284 | 147 | 161 | PR01869 | Beta-catenin | |
| IPR013284 | 198 | 219 | PR01869 | Beta-catenin | |
| IPR013284 | 262 | 281 | PR01869 | Beta-catenin | |
| IPR013284 | 318 | 340 | PR01869 | Beta-catenin | |
| IPR013284 | 348 | 372 | PR01869 | Beta-catenin | |
| IPR013284 | 472 | 497 | PR01869 | Beta-catenin | |
| IPR013284 | 516 | 537 | PR01869 | Beta-catenin | |
| IPR013284 | 631 | 653 | PR01869 | Beta-catenin | |
| HMMPfam | IPR000357 | 173 | 209 | PF02985 | HEAT |
| IPR000225 | 251 | 291 | PF00514 | Armadillo | |
| IPR000225 | 377 | 417 | PF00514 | Armadillo | |
| IPR000225 | 418 | 456 | PF00514 | Armadillo | |
| IPR000225 | 458 | 500 | PF00514 | Armadillo | |
| IPR000225 | 609 | 649 | PF00514 | Armadillo | |
| IPR000225 | 650 | 690 | PF00514 | Armadillo | |
| HMMSmart | IPR000225 | 168 | 207 | SM00185 | Armadillo |
| IPR000225 | 208 | 250 | SM00185 | Armadillo | |
| IPR000225 | 251 | 291 | SM00185 | Armadillo | |
| IPR000225 | 292 | 333 | SM00185 | Armadillo | |
| IPR000225 | 335 | 376 | SM00185 | Armadillo | |
| IPR000225 | 377 | 417 | SM00185 | Armadillo | |
| IPR000225 | 418 | 456 | SM00185 | Armadillo | |
| IPR000225 | 458 | 500 | SM00185 | Armadillo | |
| IPR000225 | 505 | 546 | SM00185 | Armadillo | |
| IPR000225 | 547 | 608 | SM00185 | Armadillo | |
| IPR000225 | 609 | 649 | SM00185 | Armadillo | |
| IPR000225 | 650 | 690 | SM00185 | Armadillo | |
| ProfileScan | IPR000225 | 178 | 216 | PS50176 | Armadillo |
| IPR000225 | 220 | 263 | PS50176 | Armadillo | |
| IPR000225 | 262 | 304 | PS50176 | Armadillo | |
| IPR000225 | 304 | 346 | PS50176 | Armadillo | |
| IPR000225 | 346 | 389 | PS50176 | Armadillo | |
| IPR000225 | 427 | 469 | PS50176 | Armadillo | |
| IPR000225 | 469 | 511 | PS50176 | Armadillo | |
| IPR000225 | 516 | 559 | PS50176 | Armadillo | |
| IPR000225 | 620 | 662 | PS50176 | Armadillo |
