Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01244
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Accession No
Product ID ORK01244
Clone name fk05513
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3514 bp)
Predicted protein sequence (900 aa)
Flexi ORF Clone FXC01244
Description Heterogeneous nuclear ribonucleoprotein U-like protein 1 (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5).
Features of the cloned cDNA sequence

Length: 3514 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 810 bp
Genome contig ID gi42406306f_46362249
PolyA signal sequence
Flanking genome sequence
(142873 - 142922)

Features of the protein sequence

Length: 900 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9BUJ2 0 100.0 Heterogeneous n...
Homo sapiens
XP_001149509 0 99.8 similar to E1B-...
Pan troglodytes
BAF84451 0 99.8 unnamed protein...
Homo sapiens
AAH02564 0 99.8 Heterogeneous n...
Homo sapiens
XP_001149299 0 99.5 similar to E1B-...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan NULL 735 747 PR01217 NULL
NULL 751 767 PR01217 NULL
NULL 787 799 PR01217 NULL
NULL 814 835 PR01217 NULL
NULL 840 856 PR01217 NULL
HMMPfam IPR003034 47 81 PF02037 DNA-binding SAP
IPR003877 298 431 PF00622 SPla/RYanodine receptor SPRY
HMMSmart IPR003034 47 81 SM00513 DNA-binding SAP
IPR003877 298 431 SM00449 SPla/RYanodine receptor SPRY
ProfileScan IPR003034 47 81 PS50800 DNA-binding SAP
IPR001870 235 432 PS50188 B302
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