Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01343
Order Kazusa clone(s) from : 
Japan
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Other countries |
| Accession No | AK226122 |
|---|---|
| Product ID | ORK01343 |
| Clone name | ak00083 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | SLC4A3 |
| cDNA sequence | DNA sequence (3819 bp) Predicted protein sequence (1152 aa) |
|
HaloTag ORF Clone |
FHC01343
|
| Flexi ORF Clone | FXC01343 |
| Description | Anion exchange protein 3 (Neuronal band 3-like protein) (Solute carrier family 4 member 3) (Cardiac/brain band 3-like protein) (CAE3/BAE3). |
Length: 3819 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 251 bp |
|---|---|
| Genome contig ID | gi89161199f_220100666 |
| PolyA signal sequence (None) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (114281 - 114330) |
----+----*----+----*----+----*----+----*----+----* |
Length: 1152 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR002979 | 58 | 73 | PR01189 | Anion exchanger |
| IPR002979 | 156 | 176 | PR01189 | Anion exchanger | |
| IPR001717 | 337 | 342 | PR00165 | Anion exchange protein | |
| IPR003020 | 469 | 481 | PR01231 | HCO3- transporter | |
| IPR003020 | 618 | 627 | PR01231 | HCO3- transporter | |
| IPR001717 | 627 | 634 | PR00165 | Anion exchange protein | |
| IPR001717 | 637 | 643 | PR00165 | Anion exchange protein | |
| IPR003020 | 643 | 654 | PR01231 | HCO3- transporter | |
| IPR001717 | 660 | 667 | PR00165 | Anion exchange protein | |
| IPR001717 | 700 | 708 | PR00165 | Anion exchange protein | |
| IPR003020 | 733 | 745 | PR01231 | HCO3- transporter | |
| IPR003020 | 754 | 766 | PR01231 | HCO3- transporter | |
| IPR001717 | 756 | 763 | PR00165 | Anion exchange protein | |
| IPR001717 | 811 | 821 | PR00165 | Anion exchange protein | |
| IPR001717 | 824 | 833 | PR00165 | Anion exchange protein | |
| IPR003020 | 849 | 858 | PR01231 | HCO3- transporter | |
| IPR001717 | 894 | 902 | PR00165 | Anion exchange protein | |
| IPR003020 | 918 | 927 | PR01231 | HCO3- transporter | |
| IPR003020 | 932 | 945 | PR01231 | HCO3- transporter | |
| IPR001717 | 948 | 956 | PR00165 | Anion exchange protein | |
| IPR001717 | 977 | 985 | PR00165 | Anion exchange protein | |
| HMMPfam | IPR013769 | 249 | 539 | PF07565 | HCO3- transporter |
| IPR011531 | 594 | 1081 | PF00955 | HCO3-transporter | |
| HMMTigr | IPR003020 | 290 | 1151 | TIGR00834 | HCO3- transporter |
| ScanRegExp | IPR001717 | 602 | 613 | PS00219 | Anion exchange protein |
| IPR001717 | 749 | 763 | PS00220 | Anion exchange protein |
Prediction of transmembrane (TM) segments| Method | No. | N terminal | transmembrane region | C terminal | type | length | SOSUI2 | 1 | 626 | SQCVAAVLFIYFAALSPAITFGG | 648 | PRIMARY | 23 | 2 | 666 | STAVLGVLFSLLGAQPLLVVGFS | 688 | PRIMARY | 23 | 3 | 713 | RVWVGLWLVVFVLALVAAEGSFL | 735 | PRIMARY | 23 | 4 | 742 | FTQEIFAFLISLIFIYETFYKLY | 764 | PRIMARY | 23 | 5 | 812 | TALLSLILMLGTFFIAFFL | 830 | PRIMARY | 19 | 6 | 846 | IIGDFGIPISILVMVLVDYSITD | 868 | PRIMARY | 23 | 7 | 907 | VAAAVPALLVLILIFMETQITAL | 929 | PRIMARY | 23 | 8 | 945 | HLDLLLIGSLGGLCGLFGLPWLT | 967 | SECONDARY | 23 | 9 | 1013 | GLSIVMGAVLRRIPLAVLFGIFL | 1035 | PRIMARY | 23 | 10 | 1082 | QLGCIALLWVVKSTAASLAFPFL | 1104 | PRIMARY | 23 |
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