Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01421
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01421 |
| Clone name | fk12595 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | PLA2G6 |
| cDNA sequence | DNA sequence (3157 bp) Predicted protein sequence (823 aa) |
|
HaloTag ORF Clone |
FHC01421
|
| Flexi ORF Clone | FXC01421 |
| Description | 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4) (iPLA2) (CaI- PLA2) (Group VI phospholipase A2) (GVI PLA2). |
Length: 3157 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 664 bp |
|---|---|
| Genome contig ID | gi89161203r_36737450 |
| PolyA signal sequence (AATAAA,-23) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 823 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR002110 | 237 | 249 | PR01415 | Ankyrin |
| IPR002110 | 313 | 325 | PR01415 | Ankyrin | |
| HMMPfam | IPR002110 | 168 | 201 | PF00023 | Ankyrin |
| IPR002110 | 202 | 235 | PF00023 | Ankyrin | |
| IPR002110 | 236 | 268 | PF00023 | Ankyrin | |
| IPR002110 | 303 | 332 | PF00023 | Ankyrin | |
| IPR002110 | 333 | 365 | PF00023 | Ankyrin | |
| IPR002110 | 366 | 398 | PF00023 | Ankyrin | |
| IPR002641 | 498 | 682 | PF01734 | Patatin | |
| HMMSmart | IPR002110 | 168 | 198 | SM00248 | Ankyrin |
| IPR002110 | 202 | 232 | SM00248 | Ankyrin | |
| IPR002110 | 236 | 265 | SM00248 | Ankyrin | |
| IPR002110 | 303 | 329 | SM00248 | Ankyrin | |
| IPR002110 | 333 | 362 | SM00248 | Ankyrin | |
| IPR002110 | 366 | 395 | SM00248 | Ankyrin | |
| ProfileScan | IPR002110 | 168 | 201 | PS50088 | Ankyrin |
| IPR002110 | 168 | 429 | PS50297 | Ankyrin | |
| IPR002110 | 236 | 268 | PS50088 | Ankyrin | |
| IPR002110 | 333 | 365 | PS50088 | Ankyrin | |
| IPR002110 | 366 | 398 | PS50088 | Ankyrin |
