Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01426
Order Kazusa clone(s) from : Japan || Other countries
Accession No
Product ID ORK01426
Clone name fk13967
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (2706 bp)
Predicted protein sequence (442 aa)
Flexi ORF Clone FXC01426
Description heterogeneous nuclear ribonucleoprotein K
Features of the cloned cDNA sequence

Length: 2706 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1228 bp
Genome contig ID gi89161216r_85672914
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 442 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92799 6e-150 100.0 heterogeneous n...
Homo sapiens
BAG10834 2.9e-149 100.0 heterogeneous n...
synthetic construct
XP_857250 8.1e-148 99.0 similar to hete...
Canis lupus fam...
BAC34601 3e-147 99.7 unnamed protein...
Mus musculus
BAE31602 2.4e-146 98.1 unnamed protein...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR012987 3 45 PF08067 ROK
IPR004088 46 106 PF00013 K Homology
IPR004088 124 187 PF00013 K Homology
IPR004088 367 429 PF00013 K Homology
HMMSmart IPR004087 43 111 SM00322 K Homology
IPR004087 121 192 SM00322 K Homology
IPR004087 364 434 SM00322 K Homology
ProfileScan IPR004088 44 106 PS50084 K Homology
IPR004088 122 187 PS50084 K Homology
IPR004088 365 429 PS50084 K Homology
Order Kazusa clone(s) from : Japan || Other countries
Send a message to office AT kazusa.or.jp