Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01460
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01460 |
| Clone name | bm05643 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | ZNF8 |
| cDNA sequence | DNA sequence (2076 bp) Predicted protein sequence (602 aa) |
|
HaloTag ORF Clone |
FHC01460
|
| Flexi ORF Clone | FXC01460 |
| Description | Zinc finger protein 8 (Zinc finger protein HF.18). |
Length: 2076 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 266 bp |
|---|---|
| Genome contig ID | gi42406306f_63382178 |
| PolyA signal sequence (AATATA,-28) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (116804 - 116853) |
----+----*----+----*----+----*----+----*----+----* |
Length: 602 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 284 | 307 | PD000003 | Zinc finger |
| IPR007087 | 312 | 335 | PD000003 | Zinc finger | |
| IPR007087 | 340 | 363 | PD000003 | Zinc finger | |
| IPR007087 | 368 | 391 | PD000003 | Zinc finger | |
| IPR007087 | 424 | 446 | PD000003 | Zinc finger | |
| IPR007087 | 494 | 517 | PD000003 | Zinc finger | |
| HMMPfam | IPR001909 | 52 | 92 | PF01352 | KRAB box |
| IPR007087 | 284 | 306 | PF00096 | Zinc finger | |
| IPR007087 | 312 | 334 | PF00096 | Zinc finger | |
| IPR007087 | 340 | 362 | PF00096 | Zinc finger | |
| IPR007087 | 368 | 390 | PF00096 | Zinc finger | |
| IPR007087 | 396 | 418 | PF00096 | Zinc finger | |
| IPR007087 | 424 | 446 | PF00096 | Zinc finger | |
| IPR007087 | 494 | 516 | PF00096 | Zinc finger | |
| HMMSmart | IPR001909 | 52 | 112 | SM00349 | KRAB box |
| IPR015880 | 284 | 306 | SM00355 | Zinc finger | |
| IPR015880 | 312 | 334 | SM00355 | Zinc finger | |
| IPR015880 | 340 | 362 | SM00355 | Zinc finger | |
| IPR015880 | 368 | 390 | SM00355 | Zinc finger | |
| IPR015880 | 396 | 418 | SM00355 | Zinc finger | |
| IPR015880 | 424 | 446 | SM00355 | Zinc finger | |
| IPR015880 | 494 | 516 | SM00355 | Zinc finger | |
| ProfileScan | IPR001909 | 52 | 123 | PS50805 | KRAB box |
| IPR007087 | 284 | 311 | PS50157 | Zinc finger | |
| IPR007087 | 312 | 339 | PS50157 | Zinc finger | |
| IPR007087 | 340 | 367 | PS50157 | Zinc finger | |
| IPR007087 | 368 | 395 | PS50157 | Zinc finger | |
| IPR007087 | 396 | 423 | PS50157 | Zinc finger | |
| IPR007087 | 424 | 451 | PS50157 | Zinc finger | |
| IPR007087 | 494 | 521 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 286 | 306 | PS00028 | Zinc finger |
| IPR007087 | 314 | 334 | PS00028 | Zinc finger | |
| IPR007087 | 342 | 362 | PS00028 | Zinc finger | |
| IPR007087 | 370 | 390 | PS00028 | Zinc finger | |
| IPR007087 | 398 | 418 | PS00028 | Zinc finger | |
| IPR007087 | 426 | 446 | PS00028 | Zinc finger | |
| IPR007087 | 496 | 516 | PS00028 | Zinc finger |
