Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01515
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Accession No
Product ID ORK01515
Clone name bm04608
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol USP11
cDNA sequence DNA sequence (2793 bp)
Predicted protein sequence (923 aa)
Description Ubiquitin carboxyl-terminal hydrolase 11 (EC (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) (Deubiquitinating enzyme 11).
Features of the cloned cDNA sequence

Length: 2793 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 21 bp
Genome contig ID gi89161218f_46877378
PolyA signal sequence
Flanking genome sequence
(114918 - 114967)

Features of the protein sequence

Length: 923 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAH63668 0 100.0 USP11 protein [...
Homo sapiens
AAI40850 0 100.0 Ubiquitin speci...
Homo sapiens
P51784 0 100.0 Ubiquitin carbo...
Homo sapiens
AAH00350 0 99.8 USP11 protein [...
Homo sapiens
CAH90661 0 99.3 hypothetical pr...
Pongo abelii
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR010460 104 246 PF06337 Ubiquitin carboxyl-terminal hydrolase
IPR001394 266 887 PF00443 Peptidase C19
HMMSmart IPR006615 55 147 SM00695 Ubiquitin carboxyl-terminal hydrolase
ProfileScan IPR001394 269 891 PS50235 Peptidase C19
ScanRegExp IPR001394 270 285 PS00972 Peptidase C19
IPR001394 832 849 PS00973 Peptidase C19
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