Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01560
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01560 |
| Clone name | ek00129 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | SMAD4 |
| cDNA sequence | DNA sequence (3490 bp) Predicted protein sequence (558 aa) |
|
HaloTag ORF Clone |
FHC01560
|
| Flexi ORF Clone | FXC01560 |
| Description | Mothers against decapentaplegic homolog 4 (SMAD 4) (Mothers against DPP homolog 4) (Deletion target in pancreatic carcinoma 4) (hSMAD4). |
Length: 3490 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1309 bp |
|---|---|
| Genome contig ID | gi51511735f_46710597 |
| PolyA signal sequence (AATAAA,-21) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (149549 - 149598) |
----+----*----+----*----+----*----+----*----+----* |
Length: 558 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR003619 | 39 | 143 | PF03165 | MAD homology 1 |
| IPR001132 | 323 | 538 | PF03166 | MAD homology 2 | |
| HMMSmart | IPR003619 | 37 | 146 | SM00523 | MAD homology 1 |
| IPR001132 | 327 | 536 | SM00524 | MAD homology 2 | |
| ProfileScan | IPR013019 | 24 | 148 | PS51075 | MAD homology |
| IPR001132 | 329 | 558 | PS51076 | MAD homology 2 |
