Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01711
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Accession No
Product ID ORK01711
Clone name fh12330
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol EPHA3
cDNA sequence DNA sequence (5601 bp)
Predicted protein sequence (982 aa)
Flexi ORF Clone FXC01711
Description Ephrin type-A receptor 3 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor ETK1) (HEK) (HEK4) (Tyrosine-protein kinase TYRO4).
Features of the cloned cDNA sequence

Length: 5601 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 2651 bp
Genome contig ID gi89161205f_89139591
PolyA signal sequence
(AATAAA,-27)
+----*----+----*----+----*----+----
ATTTTTATAATAAACATAATGAAAATATTTTTTAC
Flanking genome sequence
(474376 - 474425)
----+----*----+----*----+----*----+----*----+----*
AGATTGGAATACAGAAGTGGTCTTTGAAGTTTTTTAAAAATATATAAAAC

Features of the protein sequence

Length: 982 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P29320 0 100.0 Ephrin type-A r...
Homo sapiens
BAF84100 0 99.8 unnamed protein...
Homo sapiens
AAH63282 0 99.8 EPH receptor A3...
Homo sapiens
AAA58633 0 99.7 receptor protei...
Homo sapiens
XP_516601 0 99.4 ephrin receptor...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001090 36 202 PD001495 Ephrin receptor
IPR000719 627 884 PD000001 Protein kinase
FPrintScan IPR003962 450 459 PR00014 Fibronectin
IPR003962 463 473 PR00014 Fibronectin
IPR003962 486 504 PR00014 Fibronectin
IPR003962 504 518 PR00014 Fibronectin
IPR001245 698 711 PR00109 Tyrosine protein kinase
IPR001245 735 753 PR00109 Tyrosine protein kinase
IPR001245 785 795 PR00109 Tyrosine protein kinase
IPR001245 804 826 PR00109 Tyrosine protein kinase
IPR001245 848 870 PR00109 Tyrosine protein kinase
HMMPfam IPR001090 28 201 PF01404 Ephrin receptor
IPR003961 325 418 PF00041 Fibronectin
IPR003961 436 520 PF00041 Fibronectin
IPR001245 620 877 PF07714 Tyrosine protein kinase
IPR011510 907 974 PF07647 Sterile alpha motif homology 2
HMMSmart IPR001090 28 201 SM00615 Ephrin receptor
IPR003961 325 417 SM00060 Fibronectin
IPR003961 436 517 SM00060 Fibronectin
IPR002290 620 881 SM00220 Serine/threonine protein kinase
IPR001245 620 877 SM00219 Tyrosine protein kinase
IPR001660 907 974 SM00454 Sterile alpha motif SAM
ProfileScan IPR003961 324 428 PS50853 Fibronectin
IPR003961 436 527 PS50853 Fibronectin
IPR000719 620 881 PS50011 Protein kinase
IPR001660 910 974 PS50105 Sterile alpha motif SAM
ScanRegExp IPR001426 182 202 PS00790 Receptor tyrosine kinase
IPR001426 243 263 PS00791 Receptor tyrosine kinase
IPR013032 256 269 PS01186 EGF-like region
IPR000719 626 652 PS00107 Protein kinase
IPR008266 741 753 PS00109 Tyrosine protein kinase

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 4 LSILLLLSCSVLDSFGELIPQPS 26 SECONDARY 23
2 543 MIAISAAVAIILLTVVIYVLIGR 565 PRIMARY 23
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