Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01740
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AK226116 |
|---|---|
| Product ID | ORK01740 |
| Clone name | hj01740 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | OCRL |
| cDNA sequence | DNA sequence (5175 bp) Predicted protein sequence (963 aa) |
|
HaloTag ORF Clone |
FHC01740
|
| Flexi ORF Clone | FXC01740 |
| Description | Inositol polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.36) (Lowe oculocerebrorenal syndrome protein). |
Length: 5175 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 2281 bp |
|---|---|
| Genome contig ID | gi89161218f_128401913 |
| PolyA signal sequence (AATAAA,-19) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (152298 - 152347) |
----+----*----+----*----+----*----+----*----+----* |
Length: 963 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR005135 | 304 | 593 | PF03372 | Endonuclease/exonuclease/phosphatase |
| IPR000198 | 797 | 939 | PF00620 | RhoGAP | |
| HMMSmart | IPR000300 | 300 | 601 | SM00128 | Inositol polyphosphate related phosphatase |
| IPR000198 | 794 | 958 | SM00324 | RhoGAP | |
| ProfileScan | IPR000198 | 783 | 963 | PS50238 | RhoGAP |
