Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01887
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01887 |
| Clone name | ph00327 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | HIP1 |
| cDNA sequence | DNA sequence (5637 bp) Predicted protein sequence (1060 aa) |
|
HaloTag ORF Clone |
FHC01887
|
| Flexi ORF Clone | FXC01887 |
| Description | Huntingtin-interacting protein 1 (HIP-I). |
Length: 5637 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 2445 bp |
|---|---|
| Genome contig ID | gi89161213r_74903271 |
| PolyA signal sequence (None) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (99715 - 99666) |
----+----*----+----*----+----*----+----*----+----* |
Length: 1060 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR002558 | 776 | 1051 | PD011820 | I/LWEQ |
| HMMPfam | IPR011417 | 60 | 332 | PF07651 | ANTH |
| IPR002558 | 842 | 1035 | PF01608 | I/LWEQ | |
| HMMSmart | IPR013809 | 61 | 183 | SM00273 | Epsin-like |
| IPR002558 | 837 | 1035 | SM00307 | I/LWEQ | |
| ProfileScan | IPR013809 | 55 | 183 | PS50942 | Epsin-like |
| IPR002558 | 794 | 1035 | PS50945 | I/LWEQ |
