Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01890
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01890 |
| Clone name | pf02859 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | OPHN1 |
| cDNA sequence | DNA sequence (7584 bp) Predicted protein sequence (805 aa) |
|
HaloTag ORF Clone |
FHC01890
|
| Flexi ORF Clone | FXC01890 |
| Description | Oligophrenin 1. |
Length: 7584 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 4825 bp |
|---|---|
| Genome contig ID | gi89161218r_67078915 |
| PolyA signal sequence (AATAAA,-24) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 805 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR001849 | 269 | 366 | PF00169 | Pleckstrin-like |
| IPR000198 | 391 | 545 | PF00620 | RhoGAP | |
| HMMSmart | IPR001849 | 269 | 373 | SM00233 | Pleckstrin-like |
| IPR000198 | 387 | 564 | SM00324 | RhoGAP | |
| ProfileScan | IPR001849 | 268 | 371 | PS50003 | Pleckstrin-like |
| IPR000198 | 383 | 567 | PS50238 | RhoGAP |
