Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK02183
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK02183 |
| Clone name | bm03494 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | SMAD1 |
| cDNA sequence | DNA sequence (1722 bp) Predicted protein sequence (453 aa) |
|
HaloTag ORF Clone |
FHC02183
|
| Flexi ORF Clone | FXC02183 |
| Description | Mothers against decapentaplegic homolog 1 (SMAD 1) (Mothers against DPP homolog 1) (Mad-related protein 1) (Transforming growth factor- beta-signaling protein 1) (BSP-1) (hSMAD1) (JV4-1). |
Length: 1722 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 145 bp |
|---|---|
| Genome contig ID | gi89161207f_146522521 |
| PolyA signal sequence (None) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (176162 - 176211) |
----+----*----+----*----+----*----+----*----+----* |
Length: 453 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR003619 | 54 | 158 | PF03165 | MAD homology 1 |
| IPR001132 | 253 | 431 | PF03166 | MAD homology 2 | |
| HMMSmart | IPR003619 | 52 | 161 | SM00523 | MAD homology 1 |
| IPR001132 | 257 | 429 | SM00524 | MAD homology 2 | |
| ProfileScan | IPR013019 | 39 | 163 | PS51075 | MAD homology |
| IPR001132 | 259 | 453 | PS51076 | MAD homology 2 |
