Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK03194
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK03194 |
| Clone name | fj02959 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZNF542P |
| cDNA sequence | DNA sequence (2527 bp) Predicted protein sequence (263 aa) |
|
HaloTag ORF Clone |
FHC03194
|
| Flexi ORF Clone | FXC03194 |
| Description | zinc finger protein 542 |
Length: 2527 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO
Length: 263 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 39 | 62 | PD000003 | Zinc finger |
| IPR007087 | 67 | 90 | PD000003 | Zinc finger | |
| IPR007087 | 95 | 118 | PD000003 | Zinc finger | |
| IPR007087 | 123 | 146 | PD000003 | Zinc finger | |
| IPR007087 | 151 | 174 | PD000003 | Zinc finger | |
| IPR007087 | 179 | 202 | PD000003 | Zinc finger | |
| IPR007087 | 207 | 230 | PD000003 | Zinc finger | |
| HMMPfam | IPR007087 | 11 | 33 | PF00096 | Zinc finger |
| IPR007087 | 39 | 61 | PF00096 | Zinc finger | |
| IPR007087 | 67 | 89 | PF00096 | Zinc finger | |
| IPR007087 | 95 | 117 | PF00096 | Zinc finger | |
| IPR007087 | 123 | 145 | PF00096 | Zinc finger | |
| IPR007087 | 151 | 173 | PF00096 | Zinc finger | |
| IPR007087 | 179 | 201 | PF00096 | Zinc finger | |
| IPR007087 | 207 | 229 | PF00096 | Zinc finger | |
| IPR007087 | 235 | 257 | PF00096 | Zinc finger | |
| HMMSmart | IPR015880 | 11 | 33 | SM00355 | Zinc finger |
| IPR015880 | 39 | 61 | SM00355 | Zinc finger | |
| IPR015880 | 67 | 89 | SM00355 | Zinc finger | |
| IPR015880 | 95 | 117 | SM00355 | Zinc finger | |
| IPR015880 | 123 | 145 | SM00355 | Zinc finger | |
| IPR015880 | 151 | 173 | SM00355 | Zinc finger | |
| IPR015880 | 179 | 201 | SM00355 | Zinc finger | |
| IPR015880 | 207 | 229 | SM00355 | Zinc finger | |
| IPR015880 | 235 | 255 | SM00355 | Zinc finger | |
| ProfileScan | IPR007087 | 11 | 38 | PS50157 | Zinc finger |
| IPR007087 | 39 | 66 | PS50157 | Zinc finger | |
| IPR007087 | 67 | 94 | PS50157 | Zinc finger | |
| IPR007087 | 95 | 122 | PS50157 | Zinc finger | |
| IPR007087 | 123 | 150 | PS50157 | Zinc finger | |
| IPR007087 | 151 | 178 | PS50157 | Zinc finger | |
| IPR007087 | 179 | 206 | PS50157 | Zinc finger | |
| IPR007087 | 207 | 234 | PS50157 | Zinc finger | |
| IPR007087 | 235 | 262 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 13 | 33 | PS00028 | Zinc finger |
| IPR007087 | 41 | 61 | PS00028 | Zinc finger | |
| IPR007087 | 69 | 89 | PS00028 | Zinc finger | |
| IPR007087 | 97 | 117 | PS00028 | Zinc finger | |
| IPR007087 | 125 | 145 | PS00028 | Zinc finger | |
| IPR007087 | 153 | 173 | PS00028 | Zinc finger | |
| IPR007087 | 181 | 201 | PS00028 | Zinc finger | |
| IPR007087 | 209 | 229 | PS00028 | Zinc finger |
