Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK04543
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AK226113 |
|---|---|
| Product ID | ORK04543 |
| Clone name | hg03448 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | CFH |
| cDNA sequence | DNA sequence (6981 bp) Predicted protein sequence (708 aa) |
| Description | Complement factor H precursor (H factor 1). |
Length: 6981 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : YES Integrity of 3' end
| Length of 3'UTR | 1997 bp |
|---|---|
| Genome contig ID | gi89161185f_194812741 |
| PolyA signal sequence (ATTAAA,-18) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (170516 - 170565) |
----+----*----+----*----+----*----+----*----+----* |
Length: 708 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR000436 | 44 | 104 | PF00084 | Sushi/SCR/CCP |
| IPR000436 | 108 | 161 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 167 | 224 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 228 | 283 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 288 | 342 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 349 | 403 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 410 | 463 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 472 | 522 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 530 | 583 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 589 | 645 | PF00084 | Sushi/SCR/CCP | |
| IPR000436 | 650 | 703 | PF00084 | Sushi/SCR/CCP | |
| HMMSmart | IPR000436 | 44 | 104 | SM00032 | Sushi/SCR/CCP |
| IPR000436 | 108 | 161 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 167 | 224 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 228 | 283 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 288 | 342 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 349 | 403 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 410 | 463 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 472 | 522 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 530 | 583 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 589 | 645 | SM00032 | Sushi/SCR/CCP | |
| IPR000436 | 650 | 703 | SM00032 | Sushi/SCR/CCP | |
| ProfileScan | IPR000436 | 106 | 163 | PS50923 | Sushi/SCR/CCP |
| IPR000436 | 165 | 226 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 234 | 285 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 286 | 344 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 347 | 405 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 408 | 465 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 470 | 524 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 528 | 585 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 587 | 647 | PS50923 | Sushi/SCR/CCP | |
| IPR000436 | 648 | 705 | PS50923 | Sushi/SCR/CCP |
