Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK04788
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Accession No AB209252
Product ID ORK04788
Clone name fj20077
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol DLG2
cDNA sequence DNA sequence (3926 bp)
Predicted protein sequence (555 aa)
Description Discs large homolog 2 (Postsynaptic density protein PSD-93) (Channel- associated protein of synapse-110) (Chapsyn-110).
Features of the cloned cDNA sequence

Length: 3926 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 2019 bp
Genome contig ID gi51511727r_82919879
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 555 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92489 0 100.0 chapsyn-110 var...
Homo sapiens
EAW75094 1.2e-216 100.0 discs, large ho...
Homo sapiens
Q15700 1.2e-216 100.0 Disks large hom...
Homo sapiens
EAW75093 1.2e-216 100.0 discs, large ho...
Homo sapiens
XP_001175221 2.2e-216 99.6 chapsyn-110 iso...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001478 111 195 PF00595 PDZ/DHR/GLGF
IPR001478 206 290 PF00595 PDZ/DHR/GLGF
IPR001478 434 512 PF00595 PDZ/DHR/GLGF
HMMSmart IPR001478 119 198 SM00228 PDZ/DHR/GLGF
IPR001478 214 293 SM00228 PDZ/DHR/GLGF
IPR001478 442 515 SM00228 PDZ/DHR/GLGF
ProfileScan IPR001478 111 198 PS50106 PDZ/DHR/GLGF
IPR001478 206 293 PS50106 PDZ/DHR/GLGF
IPR001478 434 515 PS50106 PDZ/DHR/GLGF
ScanRegExp IPR000215 380 390 PS00284 Protease inhibitor I4
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