Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK04794
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Accession No AB208836
Product ID ORK04794
Clone name fg00167
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol DMD
cDNA sequence DNA sequence (6801 bp)
Predicted protein sequence (1392 aa)
Flexi ORF Clone FXC04794
Description Dystrophin.
Features of the cloned cDNA sequence

Length: 6801 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 2620 bp
Genome contig ID gi89161218r_30947259
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 1392 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92073 0 100.0 dystrophin Dp42...
Homo sapiens
EAW99062 0 99.8 dystrophin (mus...
Homo sapiens
NP_004013 0 99.9 dystrophin Dp14...
Homo sapiens
EAW99064 0 98.9 dystrophin (mus...
Homo sapiens
NP_004003 0 98.9 dystrophin Dp26...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002017 172 279 PF00435 Spectrin repeat
IPR002017 282 388 PF00435 Spectrin repeat
IPR002017 391 504 PF00435 Spectrin repeat
IPR002017 636 742 PF00435 Spectrin repeat
IPR001202 759 788 PF00397 WW/Rsp5/WWP
IPR015153 789 909 PF09068 EF-hand
IPR015154 913 1004 PF09069 EF-hand
IPR000433 1009 1054 PF00569 Zinc finger
HMMSmart IPR002017 175 278 SM00150 Spectrin repeat
IPR002017 285 387 SM00150 Spectrin repeat
IPR002017 394 503 SM00150 Spectrin repeat
IPR002017 510 632 SM00150 Spectrin repeat
IPR002017 639 741 SM00150 Spectrin repeat
IPR001202 758 790 SM00456 WW/Rsp5/WWP
IPR000433 1009 1054 SM00291 Zinc finger
ProfileScan IPR001202 757 790 PS50020 WW/Rsp5/WWP
IPR000433 1009 1056 PS50135 Zinc finger
ScanRegExp IPR001202 763 788 PS01159 WW/Rsp5/WWP
IPR000433 1015 1042 PS01357 Zinc finger
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