Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK04987
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Accession No AB209361
Product ID ORK04987
Clone name fh16409
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol FAS
cDNA sequence DNA sequence (5965 bp)
Predicted protein sequence (362 aa)
Description Tumor necrosis factor receptor superfamily member 6 precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen).
Features of the cloned cDNA sequence

Length: 5965 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1322 bp
Genome contig ID gi89161187f_90619697
PolyA signal sequence
Flanking genome sequence
(145814 - 145863)

Features of the protein sequence

Length: 362 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92598 5.1e-148 100.0 tumor necrosis ...
Homo sapiens
P25445 3.5e-132 99.6 Tumor necrosis ...
Homo sapiens
AAX36193 3.6e-132 99.6 tumor necrosis ...
synthetic construct
AAR08906 6.3e-132 99.3 tumor necrosis ...
Homo sapiens
AAV38887 6.4e-132 99.3 tumor necrosis ...
synthetic construct
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR008063 89 103 PR01680 Fas receptor
IPR008063 105 115 PR01680 Fas receptor
IPR008063 127 143 PR01680 Fas receptor
IPR008063 145 172 PR01680 Fas receptor
IPR008063 250 265 PR01680 Fas receptor
HMMPfam IPR001368 112 154 PF00020 TNFR/CD27/30/40/95 cysteine-rich region
IPR001368 156 192 PF00020 TNFR/CD27/30/40/95 cysteine-rich region
IPR000488 258 341 PF00531 Death
HMMSmart IPR001368 76 109 SM00208 TNFR/CD27/30/40/95 cysteine-rich region
IPR001368 112 154 SM00208 TNFR/CD27/30/40/95 cysteine-rich region
IPR001368 156 192 SM00208 TNFR/CD27/30/40/95 cysteine-rich region
IPR000488 245 341 SM00005 Death
ProfileScan IPR001368 111 154 PS50050 TNFR/CD27/30/40/95 cysteine-rich region
IPR001368 155 192 PS50050 TNFR/CD27/30/40/95 cysteine-rich region
IPR000488 257 341 PS50017 Death
ScanRegExp IPR001368 112 156 PS00652 TNFR/CD27/30/40/95 cysteine-rich region

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
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