Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK05941
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Accession No AB209765
Product ID ORK05941
Clone name bm00412
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol MBD1
cDNA sequence DNA sequence (1953 bp)
Predicted protein sequence (397 aa)
Description Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding protein MBD1) (Protein containing methyl-CpG-binding domain 1).
Features of the cloned cDNA sequence

Length: 1953 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Features of the protein sequence

Length: 397 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD93002 2e-130 100.0 methyl-CpG bind...
Homo sapiens
BAE00563 2.6e-73 77.7 unnamed protein...
Macaca fascicularis
AAD51445 2.4e-58 81.3 methyl-CpG bind...
Homo sapiens
AAD51443 6.8e-51 70.9 methyl-CpG bind...
Homo sapiens
EAW62966 1.7e-50 70.9 methyl-CpG bind...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002857 92 137 PF02008 Zinc finger
ProfileScan IPR002857 93 138 PS51058 Zinc finger
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