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Other countries |
Accession No | AB209443 |
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Product ID | ORK06110 |
Clone name | pj02402 |
Vector information | |
Symbol | NCAM1 |
cDNA sequence | DNA sequence (4696 bp) Predicted protein sequence (807 aa) |
Description | Neural cell adhesion molecule 1, 140 kDa isoform precursor (N-CAM 140) (NCAM-140) (CD56 antigen). |
Length of 3'UTR | 2270 bp |
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Genome contig ID | gi51511727f_112237300 |
PolyA signal sequence (ATTAAA,-25) |
+----*----+----*----+----*----+---- |
Flanking genome sequence (403829 - 403878) |
----+----*----+----*----+----*----+----*----+----* |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
FPrintScan | IPR009138 | 101 | 128 | PR01838 | Neural cell adhesion |
IPR009138 | 194 | 221 | PR01838 | Neural cell adhesion | |
IPR009138 | 272 | 300 | PR01838 | Neural cell adhesion | |
IPR009138 | 366 | 395 | PR01838 | Neural cell adhesion | |
HMMPfam | IPR013098 | 101 | 195 | PF07679 | Immunoglobulin I-set |
IPR013151 | 213 | 272 | PF00047 | Immunoglobulin | |
IPR013098 | 295 | 385 | PF07679 | Immunoglobulin I-set | |
IPR013098 | 389 | 483 | PF07679 | Immunoglobulin I-set | |
IPR013151 | 500 | 562 | PF00047 | Immunoglobulin | |
IPR003961 | 581 | 669 | PF00041 | Fibronectin | |
IPR003961 | 683 | 767 | PF00041 | Fibronectin | |
HMMSmart | IPR003599 | 107 | 196 | SM00409 | Immunoglobulin subtype |
IPR003598 | 113 | 184 | SM00408 | Immunoglobulin subtype 2 | |
IPR003599 | 205 | 290 | SM00409 | Immunoglobulin subtype | |
IPR003598 | 211 | 277 | SM00408 | Immunoglobulin subtype 2 | |
IPR003599 | 301 | 386 | SM00409 | Immunoglobulin subtype | |
IPR003598 | 307 | 375 | SM00408 | Immunoglobulin subtype 2 | |
IPR003599 | 395 | 484 | SM00409 | Immunoglobulin subtype | |
IPR003598 | 401 | 473 | SM00408 | Immunoglobulin subtype 2 | |
IPR003599 | 492 | 579 | SM00409 | Immunoglobulin subtype | |
IPR003598 | 498 | 567 | SM00408 | Immunoglobulin subtype 2 | |
IPR003961 | 581 | 666 | SM00060 | Fibronectin | |
IPR003961 | 683 | 764 | SM00060 | Fibronectin | |
ProfileScan | IPR007110 | 101 | 192 | PS50835 | Immunoglobulin-like |
IPR007110 | 197 | 270 | PS50835 | Immunoglobulin-like | |
IPR007110 | 293 | 382 | PS50835 | Immunoglobulin-like | |
IPR007110 | 389 | 484 | PS50835 | Immunoglobulin-like | |
IPR007110 | 487 | 572 | PS50835 | Immunoglobulin-like | |
IPR003961 | 577 | 676 | PS50853 | Fibronectin | |
IPR003961 | 679 | 773 | PS50853 | Fibronectin |
Method | No. | N terminal | transmembrane region | C terminal | type | length | SOSUI2 | 1 | 5 | DLRVASVLRLGLSLILRSAR | 24 | SECONDARY | 20 | 2 | 86 | KDLIWTLFFLGTAVSLQVDIVP | 107 | PRIMARY | 22 | 3 | 786 | GNSASYTFVSLLFSAVTLLLLC | 807 | PRIMARY | 22 |
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