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Accession No | AB209314 |
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Product ID | ORK06446 |
Clone name | fh03042 |
Vector information | |
Symbol | PPFIA1 |
cDNA sequence | DNA sequence (5159 bp) Predicted protein sequence (696 aa) |
Description | Liprin-alpha-1 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-1) (PTPRF-interacting protein alpha-1) (LAR-interacting protein 1) (LIP.1). |
Length of 3'UTR | 1397 bp |
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Genome contig ID | gi51511727f_69694527 |
PolyA signal sequence (AATAAA,-22) |
+----*----+----*----+----*----+---- |
Flanking genome sequence (213616 - 213665) |
----+----*----+----*----+----*----+----*----+----* |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
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HMMPfam | IPR001660 | 370 | 436 | PF00536 | Sterile alpha motif SAM |
IPR001660 | 455 | 519 | PF00536 | Sterile alpha motif SAM | |
IPR011510 | 542 | 614 | PF07647 | Sterile alpha motif homology 2 | |
HMMSmart | IPR001660 | 369 | 438 | SM00454 | Sterile alpha motif SAM |
IPR001660 | 454 | 521 | SM00454 | Sterile alpha motif SAM | |
IPR001660 | 542 | 614 | SM00454 | Sterile alpha motif SAM | |
ProfileScan | IPR001660 | 372 | 438 | PS50105 | Sterile alpha motif SAM |
IPR001660 | 464 | 521 | PS50105 | Sterile alpha motif SAM | |
IPR001660 | 545 | 614 | PS50105 | Sterile alpha motif SAM |
Method | No. | N terminal | transmembrane region | C terminal | type | length | SOSUI2 | 1 | 374 | GPTVVVWLELWVGMPAWYVAACR | 396 | PRIMARY | 23 |
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