Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07100
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209159 |
|---|---|
| Product ID | ORK07100 |
| Clone name | aj00807 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | TG |
| cDNA sequence | DNA sequence (5065 bp) Predicted protein sequence (1574 aa) |
| Description | Thyroglobulin precursor. |
Length: 5065 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 103 bp |
|---|---|
| Genome contig ID | gi51511724f_133879116 |
| PolyA signal sequence (AATAAA,-22) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (337209 - 337258) |
----+----*----+----*----+----*----+----*----+----* |
Length: 1574 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR011641 | 271 | 316 | PF07699 | GCC2 and GCC3 |
| IPR002018 | 994 | 1524 | PF00135 | Carboxylesterase | |
| HMMSmart | IPR000716 | 326 | 375 | SM00211 | Thyroglobulin type-1 |
| ProfileScan | IPR000716 | 317 | 371 | PS51162 | Thyroglobulin type-1 |
| ScanRegExp | IPR000716 | 325 | 354 | PS00484 | Thyroglobulin type-1 |
| IPR002018 | 1085 | 1095 | PS00941 | Carboxylesterase |
