Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK07101
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Accession No AB209598
Product ID ORK07101
Clone name sj06804
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol TGFBI
cDNA sequence DNA sequence (4751 bp)
Predicted protein sequence (242 aa)
Description Transforming growth factor-beta-induced protein ig-h3 precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP).
Features of the cloned cDNA sequence

Length: 4751 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : YES
Features of the protein sequence

Length: 242 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92835 4.1e-98 100.0 transforming gr...
 Homo sapiens
BAG52805 9.7e-84 99.5 unnamed protein...
 Homo sapiens
AAC08449 9.8e-84 99.5 BIGH3 [Homo sap...
 Homo sapiens
BAG52785 1e-83 99.5 unnamed protein...
 Homo sapiens
XP_001169033 1.2e-83 99.5 transforming gr...
 Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000782 19 140 PF02469 Beta-Ig-H3/fasciclin
IPR000782 154 232 PF02469 Beta-Ig-H3/fasciclin
HMMSmart IPR000782 43 141 SM00554 Beta-Ig-H3/fasciclin
IPR000782 178 241 SM00554 Beta-Ig-H3/fasciclin
ProfileScan IPR000782 1 138 PS50213 Beta-Ig-H3/fasciclin
IPR000782 142 242 PS50213 Beta-Ig-H3/fasciclin
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