ORK07568

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK07568

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Accession No	AB209500
Product ID	ORK07568
Clone name	ff07759
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	ZNF506
cDNA sequence	DNA sequence (4092 bp) Predicted protein sequence (246 aa)
Description	Homo sapiens mRNA for PREDICTED: similar to Zinc finger protein 93 (Zinc finger protein HTF34) variant protein.

Features of the cloned cDNA sequence

Description

Length: 4092 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: NO

Warning for coding interruption : NO

Features of the protein sequence

Description

Length: 246 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD92737	5.7e-103	100.0	similar to Zinc...	Homo sapiens
EAW84861	3.5e-99	100.0	hCG1775444 [Hom...	Homo sapiens
Q5JVG8	7.3e-99	99.5	Zinc finger pro...	Homo sapiens
EAW84877	2.8e-72	74.3	hCG1821184 [Hom...	Homo sapiens
O75373	3.9e-72	74.7	Zinc finger pro...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR007087	135	158	PD000003	Zinc finger
	IPR007087	163	186	PD000003	Zinc finger
	IPR007087	191	214	PD000003	Zinc finger
	IPR007087	219	242	PD000003	Zinc finger
HMMPfam	IPR007087	135	157	PF00096	Zinc finger
	IPR007087	163	185	PF00096	Zinc finger
	IPR007087	191	213	PF00096	Zinc finger
	IPR007087	219	241	PF00096	Zinc finger
HMMSmart	IPR015880	135	157	SM00355	Zinc finger
	IPR015880	163	185	SM00355	Zinc finger
	IPR015880	191	213	SM00355	Zinc finger
	IPR015880	219	241	SM00355	Zinc finger
ProfileScan	IPR007087	135	162	PS50157	Zinc finger
	IPR007087	163	190	PS50157	Zinc finger
	IPR007087	191	218	PS50157	Zinc finger
	IPR007087	219	246	PS50157	Zinc finger
ScanRegExp	IPR007087	137	157	PS00028	Zinc finger
	IPR007087	165	185	PS00028	Zinc finger
	IPR007087	193	213	PS00028	Zinc finger
	IPR007087	221	241	PS00028	Zinc finger

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