Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07616
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209287 |
|---|---|
| Product ID | ORK07616 |
| Clone name | fk05937 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | FN1 |
| cDNA sequence | DNA sequence (3726 bp) Predicted protein sequence (1011 aa) |
| Description | Homo sapiens mRNA for Fibronectin 1 variant protein. |
Length: 3726 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 689 bp |
|---|---|
| Genome contig ID | gi89161199r_215833834 |
| PolyA signal sequence (AATAAA,-19) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 1011 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR003962 | 27 | 36 | PR00014 | Fibronectin |
| IPR003962 | 128 | 138 | PR00014 | Fibronectin | |
| IPR003962 | 152 | 170 | PR00014 | Fibronectin | |
| IPR003962 | 354 | 368 | PR00014 | Fibronectin | |
| IPR000083 | 880 | 891 | PR00012 | Fibronectin | |
| IPR000083 | 901 | 909 | PR00012 | Fibronectin | |
| HMMPfam | IPR003961 | 13 | 93 | PF00041 | Fibronectin |
| IPR003961 | 104 | 183 | PF00041 | Fibronectin | |
| IPR003961 | 194 | 276 | PF00041 | Fibronectin | |
| IPR003961 | 288 | 367 | PF00041 | Fibronectin | |
| IPR003961 | 378 | 457 | PF00041 | Fibronectin | |
| IPR003961 | 470 | 548 | PF00041 | Fibronectin | |
| IPR003961 | 559 | 638 | PF00041 | Fibronectin | |
| IPR003961 | 729 | 806 | PF00041 | Fibronectin | |
| IPR000083 | 831 | 870 | PF00039 | Fibronectin | |
| IPR000083 | 876 | 913 | PF00039 | Fibronectin | |
| IPR000083 | 920 | 955 | PF00039 | Fibronectin | |
| HMMSmart | IPR003961 | 13 | 93 | SM00060 | Fibronectin |
| IPR003961 | 104 | 183 | SM00060 | Fibronectin | |
| IPR003961 | 194 | 273 | SM00060 | Fibronectin | |
| IPR003961 | 288 | 367 | SM00060 | Fibronectin | |
| IPR003961 | 378 | 457 | SM00060 | Fibronectin | |
| IPR003961 | 470 | 549 | SM00060 | Fibronectin | |
| IPR003961 | 559 | 640 | SM00060 | Fibronectin | |
| IPR003961 | 730 | 806 | SM00060 | Fibronectin | |
| IPR000083 | 831 | 875 | SM00058 | Fibronectin | |
| IPR000083 | 876 | 918 | SM00058 | Fibronectin | |
| IPR000083 | 920 | 960 | SM00058 | Fibronectin | |
| ProfileScan | IPR003961 | 12 | 102 | PS50853 | Fibronectin |
| IPR003961 | 103 | 192 | PS50853 | Fibronectin | |
| IPR003961 | 193 | 282 | PS50853 | Fibronectin | |
| IPR003961 | 287 | 376 | PS50853 | Fibronectin | |
| IPR003961 | 379 | 466 | PS50853 | Fibronectin | |
| IPR003961 | 469 | 557 | PS50853 | Fibronectin | |
| IPR003961 | 558 | 647 | PS50853 | Fibronectin | |
| IPR003961 | 729 | 815 | PS50853 | Fibronectin | |
| IPR000083 | 829 | 873 | PS51091 | Fibronectin | |
| IPR000083 | 874 | 916 | PS51091 | Fibronectin | |
| IPR000083 | 918 | 958 | PS51091 | Fibronectin | |
| ScanRegExp | IPR002086 | 229 | 236 | PS00687 | Aldehyde dehydrogenase |
| IPR000083 | 831 | 870 | PS01253 | Fibronectin | |
| IPR000083 | 876 | 913 | PS01253 | Fibronectin | |
| IPR000083 | 920 | 955 | PS01253 | Fibronectin | |
| IPR013032 | 944 | 955 | PS00022 | EGF-like region |
