Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07619
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209550 |
|---|---|
| Product ID | ORK07619 |
| Clone name | fk12521 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZNF486 |
| cDNA sequence | DNA sequence (3602 bp) Predicted protein sequence (403 aa) |
| Description | Homo sapiens mRNA for PREDICTED: KRAB domain only 2 variant protein. |
Length: 3602 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 2390 bp |
|---|---|
| Genome contig ID | gi42406306f_20057819 |
| PolyA signal sequence (AATAAA,-28) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (114482 - 114531) |
----+----*----+----*----+----*----+----*----+----* |
Length: 403 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 150 | 173 | PD000003 | Zinc finger |
| IPR007087 | 178 | 201 | PD000003 | Zinc finger | |
| IPR007087 | 206 | 229 | PD000003 | Zinc finger | |
| IPR007087 | 234 | 257 | PD000003 | Zinc finger | |
| IPR007087 | 262 | 285 | PD000003 | Zinc finger | |
| IPR007087 | 290 | 313 | PD000003 | Zinc finger | |
| IPR007087 | 318 | 341 | PD000003 | Zinc finger | |
| IPR007087 | 346 | 369 | PD000003 | Zinc finger | |
| IPR007087 | 374 | 396 | PD000003 | Zinc finger | |
| HMMPfam | IPR007087 | 150 | 172 | PF00096 | Zinc finger |
| IPR007087 | 178 | 200 | PF00096 | Zinc finger | |
| IPR007087 | 206 | 228 | PF00096 | Zinc finger | |
| IPR007087 | 234 | 256 | PF00096 | Zinc finger | |
| IPR007087 | 262 | 284 | PF00096 | Zinc finger | |
| IPR007087 | 290 | 312 | PF00096 | Zinc finger | |
| IPR007087 | 318 | 340 | PF00096 | Zinc finger | |
| IPR007087 | 346 | 368 | PF00096 | Zinc finger | |
| IPR007087 | 374 | 396 | PF00096 | Zinc finger | |
| HMMSmart | IPR015880 | 94 | 116 | SM00355 | Zinc finger |
| IPR015880 | 150 | 172 | SM00355 | Zinc finger | |
| IPR015880 | 178 | 200 | SM00355 | Zinc finger | |
| IPR015880 | 206 | 228 | SM00355 | Zinc finger | |
| IPR015880 | 234 | 256 | SM00355 | Zinc finger | |
| IPR015880 | 262 | 284 | SM00355 | Zinc finger | |
| IPR015880 | 290 | 312 | SM00355 | Zinc finger | |
| IPR015880 | 318 | 340 | SM00355 | Zinc finger | |
| IPR015880 | 346 | 368 | SM00355 | Zinc finger | |
| IPR015880 | 374 | 396 | SM00355 | Zinc finger | |
| ProfileScan | IPR007087 | 94 | 121 | PS50157 | Zinc finger |
| IPR007087 | 150 | 177 | PS50157 | Zinc finger | |
| IPR007087 | 178 | 205 | PS50157 | Zinc finger | |
| IPR007087 | 206 | 233 | PS50157 | Zinc finger | |
| IPR007087 | 234 | 261 | PS50157 | Zinc finger | |
| IPR007087 | 262 | 289 | PS50157 | Zinc finger | |
| IPR007087 | 290 | 317 | PS50157 | Zinc finger | |
| IPR007087 | 318 | 345 | PS50157 | Zinc finger | |
| IPR007087 | 346 | 373 | PS50157 | Zinc finger | |
| IPR007087 | 374 | 401 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 152 | 172 | PS00028 | Zinc finger |
| IPR007087 | 180 | 200 | PS00028 | Zinc finger | |
| IPR007087 | 208 | 228 | PS00028 | Zinc finger | |
| IPR007087 | 236 | 256 | PS00028 | Zinc finger | |
| IPR007087 | 264 | 284 | PS00028 | Zinc finger | |
| IPR007087 | 292 | 312 | PS00028 | Zinc finger | |
| IPR007087 | 320 | 340 | PS00028 | Zinc finger | |
| IPR007087 | 348 | 368 | PS00028 | Zinc finger | |
| IPR007087 | 376 | 396 | PS00028 | Zinc finger |
