Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07775
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK07775 |
| Clone name | fk11832 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | XRCC5 |
| cDNA sequence | DNA sequence (3350 bp) Predicted protein sequence (756 aa) |
|
HaloTag ORF Clone |
FHC07775
|
| Flexi ORF Clone | FXC07775 |
| Description | X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) |
Length: 3350 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1078 bp |
|---|---|
| Genome contig ID | gi89161199f_216582332 |
| PolyA signal sequence (ATTAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (196918 - 196967) |
----+----*----+----*----+----*----+----*----+----* |
Length: 756 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR005161 | 33 | 268 | PF03731 | Ku70/Ku80 |
| IPR006164 | 275 | 484 | PF02735 | DNA helicase | |
| IPR005160 | 499 | 595 | PF03730 | Ku70/Ku80 C-terminal arm | |
| IPR014893 | 614 | 733 | PF08785 | Ku | |
| HMMSmart | IPR002035 | 31 | 273 | SM00327 | von Willebrand factor |
| IPR006164 | 326 | 465 | SM00559 | DNA helicase |
