Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK10480
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Accession No
Product ID ORK10480
Clone name fk06583
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol CTTN
cDNA sequence DNA sequence (3233 bp)
Predicted protein sequence (560 aa)
Flexi ORF Clone FXC10480
Description cortactin
Features of the cloned cDNA sequence

Length: 3233 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1411 bp
Genome contig ID gi51511727f_69822297
PolyA signal sequence
Flanking genome sequence
(138033 - 138082)

Features of the protein sequence

Length: 560 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14247 2.5e-187 100.0 Src substrate c...
Homo sapiens
BAD96333 4.1e-187 99.8 cortactin isofo...
Homo sapiens
AAA58455 5.3e-187 99.8 amplaxin [Homo ...
Homo sapiens
EAW74770 4.8e-185 98.3 cortactin, isof...
Homo sapiens
XP_001100193 6.9e-185 98.3 similar to cort...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001452 506 557 PD000066 Src homology-3
FPrintScan IPR000108 407 424 PR00499 Neutrophil cytosol factor 2
IPR001452 505 515 PR00452 Src homology-3
IPR000108 507 527 PR00499 Neutrophil cytosol factor 2
IPR001452 519 534 PR00452 Src homology-3
IPR000108 527 543 PR00499 Neutrophil cytosol factor 2
IPR001452 536 545 PR00452 Src homology-3
IPR000108 543 556 PR00499 Neutrophil cytosol factor 2
IPR001452 547 559 PR00452 Src homology-3
HMMPfam IPR003134 93 129 PF02218 Hs1/Cortactin
IPR003134 130 166 PF02218 Hs1/Cortactin
IPR003134 167 203 PF02218 Hs1/Cortactin
IPR003134 204 240 PF02218 Hs1/Cortactin
IPR003134 241 277 PF02218 Hs1/Cortactin
IPR003134 278 314 PF02218 Hs1/Cortactin
IPR003134 315 351 PF02218 Hs1/Cortactin
IPR001452 505 559 PF00018 Src homology-3
HMMSmart IPR001452 505 560 SM00326 Src homology-3
ProfileScan IPR003134 90 126 PS51090 Hs1/Cortactin
IPR003134 127 163 PS51090 Hs1/Cortactin
IPR003134 164 200 PS51090 Hs1/Cortactin
IPR003134 201 237 PS51090 Hs1/Cortactin
IPR003134 238 274 PS51090 Hs1/Cortactin
IPR003134 275 311 PS51090 Hs1/Cortactin
IPR003134 312 334 PS51090 Hs1/Cortactin
IPR001452 502 560 PS50002 Src homology-3
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