Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK10507
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK10507 |
| Clone name | bm02481 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | HARS |
| cDNA sequence | DNA sequence (1930 bp) Predicted protein sequence (525 aa) |
|
HaloTag ORF Clone |
FHC10507
|
| Flexi ORF Clone | FXC10507 |
| Description | histidyl-tRNA synthetase |
Length: 1930 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 351 bp |
|---|---|
| Genome contig ID | gi51511721r_139933675 |
| PolyA signal sequence (AATAAA,-21) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 525 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR000738 | 23 | 76 | PF00458 | WHEP-TRS |
| IPR002314 | 88 | 250 | PF00587 | Aminoacyl-tRNA synthetase | |
| IPR004154 | 426 | 517 | PF03129 | Anticodon-binding | |
| HMMTigr | IPR015807 | 69 | 514 | TIGR00442 | Histidyl-tRNA synthetase |
| ProfileScan | IPR000738 | 19 | 75 | PS51185 | WHEP-TRS |
| IPR006195 | 53 | 409 | PS50862 | Aminoacyl-tRNA synthetase | |
| ScanRegExp | IPR000738 | 30 | 58 | PS00762 | WHEP-TRS |
