Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK10515
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK10515 |
| Clone name | ee22358 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | RBBP5 |
| cDNA sequence | DNA sequence (3270 bp) Predicted protein sequence (563 aa) |
|
HaloTag ORF Clone |
FHC10515
|
| Flexi ORF Clone | FXC10515 |
| Description | retinoblastoma binding protein 5 |
Length: 3270 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1573 bp |
|---|---|
| Genome contig ID | gi89161185r_203223246 |
| PolyA signal sequence (None) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (99720 - 99671) |
----+----*----+----*----+----*----+----*----+----* |
Length: 563 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR001680 | 55 | 77 | PF00400 | WD40 repeat |
| IPR001680 | 81 | 119 | PF00400 | WD40 repeat | |
| HMMSmart | IPR001680 | 39 | 77 | SM00320 | WD40 repeat |
| IPR001680 | 80 | 119 | SM00320 | WD40 repeat | |
| IPR001680 | 207 | 251 | SM00320 | WD40 repeat | |
| IPR001680 | 266 | 305 | SM00320 | WD40 repeat | |
| IPR001680 | 308 | 347 | SM00320 | WD40 repeat | |
| ProfileScan | IPR001680 | 61 | 128 | PS50294 | WD40 repeat |
| IPR001680 | 87 | 128 | PS50082 | WD40 repeat |
