Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK11614
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Accession No
Product ID ORK11614
Clone name pj00226
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol PDE1C
cDNA sequence DNA sequence (4576 bp)
Predicted protein sequence (761 aa)
Flexi ORF Clone FXC11614
Description phosphodiesterase 1C, calmodulin-dependent 70kDa
Features of the cloned cDNA sequence

Length: 4576 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : YES
Integrity of 3' end
Length of 3'UTR 2201 bp
Genome contig ID gi89161213r_31657321
PolyA signal sequence
(AATAAA,-20)
+----*----+----*----+----*----+----
TATATTCTTACAGCAAATAAAAAGATGCTTTTAAC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AGACTTTCTTGTATGTGAGCCATTTTCTTCTCTGAAATTCCGGGATGTTA

Features of the protein sequence

Length: 761 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14123 0 100.0 Calcium/calmodu...
Homo sapiens
BAG52838 0 99.8 unnamed protein...
Homo sapiens
XP_001083512 0 97.1 phosphodiestera...
Macaca mulatta
XP_001500820 0 95.9 similar to Calc...
Equus caballus
EDL88062 0 95.0 phosphodiestera...
Rattus norvegicus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR002073 275 288 PR00387 3'5'-cyclic nucleotide phosphodiesterase
IPR002073 306 319 PR00387 3'5'-cyclic nucleotide phosphodiesterase
IPR002073 320 335 PR00387 3'5'-cyclic nucleotide phosphodiesterase
IPR002073 347 363 PR00387 3'5'-cyclic nucleotide phosphodiesterase
IPR002073 424 437 PR00387 3'5'-cyclic nucleotide phosphodiesterase
IPR002073 441 457 PR00387 3'5'-cyclic nucleotide phosphodiesterase
HMMPfam IPR013706 134 194 PF08499 3'5'-cyclic nucleotide phosphodiesterase N-terminal
IPR002073 279 511 PF00233 3'5'-cyclic nucleotide phosphodiesterase
HMMSmart IPR003607 277 442 SM00471 Metal-dependent phosphohydrolase
ScanRegExp IPR002073 320 331 PS00126 3'5'-cyclic nucleotide phosphodiesterase
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