Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK11642
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK11642 |
| Clone name | ef06191 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | AFAP1 |
| cDNA sequence | DNA sequence (7413 bp) Predicted protein sequence (731 aa) |
|
HaloTag ORF Clone |
FHC11642
|
| Flexi ORF Clone | FXC11642 |
| Description | actin filament associated protein 1 |
Length: 7413 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : YES Integrity of 3' end
| Length of 3'UTR | 5051 bp |
|---|---|
| Genome contig ID | gi89161207r_7711342 |
| PolyA signal sequence (AATAAA,-18) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 731 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR001849 | 155 | 250 | PF00169 | Pleckstrin-like |
| IPR001849 | 349 | 442 | PF00169 | Pleckstrin-like | |
| HMMSmart | IPR001849 | 155 | 252 | SM00233 | Pleckstrin-like |
| IPR001849 | 349 | 444 | SM00233 | Pleckstrin-like | |
| ProfileScan | IPR001849 | 154 | 250 | PS50003 | Pleckstrin-like |
| IPR001849 | 348 | 442 | PS50003 | Pleckstrin-like |
